Merge pull request #553 from zod/elev-source-cleanup
Cleanup hgt reader
This commit is contained in:
commit
11a9843f41
2 changed files with 47 additions and 336 deletions
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@ -5,22 +5,26 @@ import java.io.BufferedOutputStream;
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import java.io.DataInputStream;
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import java.io.File;
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import java.io.FileInputStream;
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import java.io.FileNotFoundException;
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import java.io.FileOutputStream;
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import java.io.InputStream;
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import java.io.OutputStream;
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import java.util.Arrays;
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import java.util.zip.ZipEntry;
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import java.util.zip.ZipInputStream;
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public class ConvertLidarTile {
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public static int NROWS;
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public static int NCOLS;
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public static int ROW_LENGTH;
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private static int NROWS;
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private static int NCOLS;
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public static final short NODATA2 = -32767; // hgt-formats nodata
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public static final short NODATA = Short.MIN_VALUE;
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public static final int SRTM3_ROW_LENGTH = 1200; // number of elevation values per line
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public static final int SRTM1_ROW_LENGTH = 3600; //-- New file resolution is 3601x3601
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private static final String HGT_FILE_EXT = ".hgt";
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private static final int HGT_BORDER_OVERLAP = 1;
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private static final int HGT_3ASEC_ROWS = 1201; // 3 arc second resolution (90m)
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private static final int HGT_3ASEC_FILE_SIZE = HGT_3ASEC_ROWS * HGT_3ASEC_ROWS * Short.BYTES;
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private static final int HGT_1ASEC_ROWS = 3601; // 1 arc second resolution (30m)
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static short[] imagePixels;
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@ -30,8 +34,8 @@ public class ConvertLidarTile {
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for (; ; ) {
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ZipEntry ze = zis.getNextEntry();
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if (ze == null) break;
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if (ze.getName().endsWith(".hgt")) {
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readHgtFromStream(zis, rowOffset, colOffset, 1200);
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if (ze.getName().toLowerCase().endsWith(HGT_FILE_EXT)) {
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readHgtFromStream(zis, rowOffset, colOffset, HGT_3ASEC_ROWS);
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return;
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}
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}
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@ -40,20 +44,20 @@ public class ConvertLidarTile {
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}
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}
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private static void readHgtFromStream(InputStream is, int rowOffset, int colOffset, int row_length)
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private static void readHgtFromStream(InputStream is, int rowOffset, int colOffset, int rowLength)
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throws Exception {
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DataInputStream dis = new DataInputStream(new BufferedInputStream(is));
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for (int ir = 0; ir < row_length + 1; ir++) {
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for (int ir = 0; ir < rowLength; ir++) {
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int row = rowOffset + ir;
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for (int ic = 0; ic < row_length + 1; ic++) {
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for (int ic = 0; ic < rowLength; ic++) {
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int col = colOffset + ic;
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int i1 = dis.read(); // msb first!
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int i0 = dis.read();
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if (i0 == -1 || i1 == -1)
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throw new RuntimeException("unexcepted end of file reading hgt entry!");
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throw new RuntimeException("unexpected end of file reading hgt entry!");
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short val = (short) ((i1 << 8) | i0);
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@ -191,80 +195,56 @@ public class ConvertLidarTile {
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}
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public SrtmRaster getRaster(File f, double lon, double lat) throws Exception {
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long fileSize;
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InputStream inputStream;
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if (f.getName().toLowerCase().endsWith(".zip")) {
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ZipInputStream zis = new ZipInputStream(new BufferedInputStream(new FileInputStream(f)));
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try {
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for (; ; ) {
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ZipEntry ze = zis.getNextEntry();
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if (ze == null) break;
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if (ze.getName().toLowerCase().endsWith(".hgt")) {
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if (ze.getSize() > ((SRTM3_ROW_LENGTH + 1) * (SRTM3_ROW_LENGTH + 1) * 2)) {
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ROW_LENGTH = SRTM1_ROW_LENGTH;
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} else {
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ROW_LENGTH = SRTM3_ROW_LENGTH;
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if (ze == null) {
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throw new FileNotFoundException(f.getName() + " doesn't contain a " + HGT_FILE_EXT + " file.");
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}
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// stay a 1x1 raster
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NROWS = ROW_LENGTH + 1;
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NCOLS = ROW_LENGTH + 1;
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imagePixels = new short[NROWS * NCOLS]; // 650 MB !
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// prefill as NODATA
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for (int row = 0; row < NROWS; row++) {
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for (int col = 0; col < NCOLS; col++) {
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imagePixels[row * NCOLS + col] = NODATA;
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}
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}
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readHgtFromStream(zis, 0, 0, ROW_LENGTH);
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if (ze.getName().toLowerCase().endsWith(HGT_FILE_EXT)) {
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fileSize = ze.getSize();
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inputStream = zis;
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break;
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}
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}
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} finally {
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zis.close();
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}
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} else {
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if (f.length() > ((SRTM3_ROW_LENGTH + 1) * (SRTM3_ROW_LENGTH + 1) * 2)) {
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ROW_LENGTH = SRTM1_ROW_LENGTH;
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} else {
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ROW_LENGTH = SRTM3_ROW_LENGTH;
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fileSize = f.length();
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inputStream = new FileInputStream(f);
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}
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// stay a 1x1 raster
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NROWS = ROW_LENGTH + 1;
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NCOLS = ROW_LENGTH + 1;
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imagePixels = new short[NROWS * NCOLS]; // 650 MB !
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int rowLength;
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if (fileSize > HGT_3ASEC_FILE_SIZE) {
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rowLength = HGT_1ASEC_ROWS;
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} else {
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rowLength = HGT_3ASEC_ROWS;
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}
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// stay at 1 deg * 1 deg raster
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NROWS = rowLength;
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NCOLS = rowLength;
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imagePixels = new short[NROWS * NCOLS];
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// prefill as NODATA
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for (int row = 0; row < NROWS; row++) {
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for (int col = 0; col < NCOLS; col++) {
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imagePixels[row * NCOLS + col] = NODATA;
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}
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}
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FileInputStream dis = new FileInputStream(f);
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try {
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readHgtFromStream(dis, 0, 0, ROW_LENGTH);
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} finally {
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dis.close();
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}
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}
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System.out.println("read file " + f + " rl " + ROW_LENGTH);
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boolean halfCol5 = false; // no halfcol tiles in lidar data (?)
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Arrays.fill(imagePixels, NODATA);
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readHgtFromStream(inputStream, 0, 0, rowLength);
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inputStream.close();
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SrtmRaster raster = new SrtmRaster();
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raster.nrows = NROWS;
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raster.ncols = NCOLS;
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raster.halfcol = halfCol5;
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raster.halfcol = false; // assume full resolution
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raster.noDataValue = NODATA;
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raster.cellsize = 1. / (double) ROW_LENGTH;
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raster.cellsize = 1. / (double) (rowLength - HGT_BORDER_OVERLAP);
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raster.xllcorner = (int) (lon < 0 ? lon - 1 : lon); //onDegreeStart - raster.cellsize;
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raster.yllcorner = (int) (lat < 0 ? lat - 1 : lat); //latDegreeStart - raster.cellsize;
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raster.eval_array = imagePixels;
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return raster;
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}
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}
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@ -1,269 +0,0 @@
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// License: GPL. For details, see LICENSE file.
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package btools.mapcreator;
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import java.io.BufferedInputStream;
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import java.io.File;
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import java.io.FileInputStream;
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import java.io.FileNotFoundException;
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import java.io.InputStream;
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import java.nio.ByteBuffer;
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import java.nio.ByteOrder;
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import java.nio.ShortBuffer;
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import java.nio.channels.FileChannel;
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import java.util.HashMap;
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import java.util.Map;
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import java.util.zip.ZipEntry;
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import java.util.zip.ZipInputStream;
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/**
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* adapted from https://github.com/JOSM/josm-plugins/blob/master/ElevationProfile/src/org/openstreetmap/josm/plugins/elevation/HgtReader.java
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* <p>
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* Class HgtReader reads data from SRTM HGT files. Currently this class is restricted to a resolution of 3 arc seconds.
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* <p>
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* SRTM data files are available at the <a href="http://dds.cr.usgs.gov/srtm/version2_1/SRTM3">NASA SRTM site</a>
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*
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* @author Oliver Wieland <oliver.wieland@online.de>
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*/
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public class HgtReader {
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final static boolean DEBUG = false;
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private static final int SECONDS_PER_MINUTE = 60;
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public static final String HGT_EXT = ".hgt";
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public static final String ZIP_EXT = ".zip";
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// alter these values for different SRTM resolutions
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public static final int HGT3_RES = 3; // resolution in arc seconds
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public static final int HGT3_ROW_LENGTH = 1201; // number of elevation values per line
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public static final int HGT_VOID = -32768; // magic number which indicates 'void data' in HGT file
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public static final int HGT1_RES = 1; // <<- The new SRTM is 1-ARCSEC
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public static final int HGT1_ROW_LENGTH = 3601; //-- New file resolution is 3601x3601
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/**
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* The 'no elevation' data magic.
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*/
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public static double NO_ELEVATION = Double.NaN;
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private static String srtmFolder = "";
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private static final Map<String, ShortBuffer> cache = new HashMap<>();
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public HgtReader(String folder) {
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srtmFolder = folder;
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}
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public static double getElevationFromHgt(double lat, double lon) {
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try {
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String file = getHgtFileName(lat, lon);
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if (DEBUG) System.out.println("SRTM buffer " + file + " for " + lat + " " + lon);
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// given area in cache?
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if (!cache.containsKey(file)) {
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// fill initial cache value. If no file is found, then
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// we use it as a marker to indicate 'file has been searched
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// but is not there'
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cache.put(file, null);
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// Try all resource directories
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//for (String location : Main.pref.getAllPossiblePreferenceDirs())
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{
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String fullPath = new File(srtmFolder, file + HGT_EXT).getPath();
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File f = new File(fullPath);
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if (f.exists()) {
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// found something: read HGT file...
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ShortBuffer data = readHgtFile(fullPath);
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// ... and store result in cache
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cache.put(file, data);
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//break;
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} else {
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fullPath = new File(srtmFolder, file + ZIP_EXT).getPath();
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f = new File(fullPath);
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if (f.exists()) {
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ZipInputStream zis = new ZipInputStream(new BufferedInputStream(new FileInputStream(f)));
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try {
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for (; ; ) {
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ZipEntry ze = zis.getNextEntry();
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if (ze == null) break;
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if (ze.getName().toLowerCase().endsWith(HGT_EXT)) {
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// System.out.println("read zip " + ze.getName());
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ShortBuffer data = readHgtStream(zis);
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// ... and store result in cache
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cache.put(file, data);
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break;
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}
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zis.closeEntry();
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}
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} finally {
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zis.close();
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}
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}
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}
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}
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}
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// read elevation value
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return readElevation(lat, lon);
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} catch (FileNotFoundException e) {
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System.err.println("SRTM Get elevation from HGT " + lat + ", " + lon + " failed: => " + e.getMessage());
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// no problem... file not there
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return NO_ELEVATION;
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} catch (Exception ioe) {
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// oops...
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ioe.printStackTrace(System.err);
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// fallback
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return NO_ELEVATION;
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}
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}
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@SuppressWarnings("resource")
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private static ShortBuffer readHgtFile(String file) throws Exception {
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if (file == null) throw new Exception("no srmt file " + file);
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FileChannel fc = null;
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ShortBuffer sb = null;
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try {
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// Eclipse complains here about resource leak on 'fc' - even with 'finally' clause???
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fc = new FileInputStream(file).getChannel();
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// choose the right endianness
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ByteBuffer bb = ByteBuffer.allocateDirect((int) fc.size());
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while (bb.remaining() > 0) fc.read(bb);
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bb.flip();
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//sb = bb.order(ByteOrder.LITTLE_ENDIAN).asShortBuffer();
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sb = bb.order(ByteOrder.BIG_ENDIAN).asShortBuffer();
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} finally {
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if (fc != null) fc.close();
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}
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return sb;
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}
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// @SuppressWarnings("resource")
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private static ShortBuffer readHgtStream(InputStream zis) throws Exception {
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if (zis == null) throw new Exception("no srmt stream ");
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ShortBuffer sb = null;
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try {
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// choose the right endianness
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byte[] bytes = zis.readAllBytes();
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ByteBuffer bb = ByteBuffer.allocate(bytes.length);
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bb.put(bytes, 0, bytes.length);
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//while (bb.remaining() > 0) zis.read(bb, 0, size);
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//ByteBuffer bb = ByteBuffer.allocate(zis.available());
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//Channels.newChannel(zis).read(bb);
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bb.flip();
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//sb = bb.order(ByteOrder.LITTLE_ENDIAN).asShortBuffer();
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sb = bb.order(ByteOrder.BIG_ENDIAN).asShortBuffer();
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} finally {
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}
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return sb;
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}
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/**
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* Reads the elevation value for the given coordinate.
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* <p>
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* See also <a href="http://gis.stackexchange.com/questions/43743/how-to-extract-elevation-from-hgt-file">stackexchange.com</a>
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*
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* @param lat, lon the coordinate to get the elevation data for
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* @return the elevation value or <code>Double.NaN</code>, if no value is present
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*/
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public static double readElevation(double lat, double lon) {
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String tag = getHgtFileName(lat, lon);
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ShortBuffer sb = cache.get(tag);
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if (sb == null) {
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return NO_ELEVATION;
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}
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if (DEBUG) System.out.println("SRTM buffer size " + sb.capacity() + " limit " + sb.limit());
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try {
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int rowLength = HGT3_ROW_LENGTH;
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int resolution = HGT3_RES;
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if (sb.capacity() > (HGT3_ROW_LENGTH * HGT3_ROW_LENGTH)) {
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rowLength = HGT1_ROW_LENGTH;
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resolution = HGT1_RES;
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}
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// see http://gis.stackexchange.com/questions/43743/how-to-extract-elevation-from-hgt-file
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double fLat = frac(lat) * SECONDS_PER_MINUTE;
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double fLon = frac(lon) * SECONDS_PER_MINUTE;
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// compute offset within HGT file
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int row = (int) Math.round((fLat) * SECONDS_PER_MINUTE / resolution);
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int col = (int) Math.round((fLon) * SECONDS_PER_MINUTE / resolution);
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if (lon < 0) col = rowLength - col - 1;
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if (lat > 0) row = rowLength - row - 1;
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//row = rowLength - row;
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int cell = (rowLength * (row)) + col;
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//int cell = ((rowLength * (latitude)) + longitude);
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if (DEBUG)
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System.out.println("Read SRTM elevation data from row/col/cell " + row + "," + col + ", " + cell + ", " + sb.limit());
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// valid position in buffer?
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if (cell < sb.limit()) {
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short ele = sb.get(cell);
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// check for data voids
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if (ele == HGT_VOID) {
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return NO_ELEVATION;
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} else {
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return ele;
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}
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} else {
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return NO_ELEVATION;
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}
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} catch (Exception e) {
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System.err.println("error at " + lon + " " + lat + " ");
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e.printStackTrace();
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}
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return NO_ELEVATION;
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}
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/**
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* Gets the associated HGT file name for the given way point. Usually the
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* format is <tt>[N|S]nn[W|E]mmm.hgt</tt> where <i>nn</i> is the integral latitude
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* without decimals and <i>mmm</i> is the longitude.
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*
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* @param llat,llon the coordinate to get the filename for
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* @return the file name of the HGT file
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*/
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public static String getHgtFileName(double llat, double llon) {
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int lat = (int) llat;
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int lon = (int) llon;
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String latPref = "N";
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if (lat < 0) {
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latPref = "S";
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lat = -lat + 1;
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}
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String lonPref = "E";
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if (lon < 0) {
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lonPref = "W";
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lon = -lon + 1;
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}
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return String.format("%s%02d%s%03d", latPref, lat, lonPref, lon);
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}
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public static double frac(double d) {
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long iPart;
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double fPart;
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// Get user input
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iPart = (long) d;
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fPart = d - iPart;
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return Math.abs(fPart);
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}
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public static void clear() {
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if (cache != null) {
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cache.clear();
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}
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}
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}
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